BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D04SP1|AL430039
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1137 1669 0.0
>3x_Contig1137
Length = 5865
Score = 1669 bits (839), Expect = 0.0
Identities = 885/903 (98%)
Strand = Plus / Minus
Query: 4 cctattgcttattttatttcgcatcgttaaagctatagatttaaaagcttatgtattagg 63
|||||| |||||||||||||||| |||||| ||||||| ||| | ||||||||||||||
Sbjct: 5702 cctattacttattttatttcgcaacgttaacactatagacttacacgcttatgtattagg 5643
Query: 64 atgtgaatttgaacacccgtttcagtccacgcacctaatagacaatacacatttgtacac 123
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 5642 atgtgaatttgaacacccgtttcagtccacgcacctactagacactacacatttgtacac 5583
Query: 124 tactacatataaatgatttaatatcttcttcggcaagacgtttttgtcatctcttttctt 183
||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 5582 tactacatatacatgatttactatattcttcggcaagacgtttttgtcatctcttttctt 5523
Query: 184 taggtaacaaacctttaaataatactttaaatgcctactaaaatcaaaatgtttaavaga 243
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5522 taggtaacaaacatttaaataatactttaaatgcctactaaaatcaaaatgtttaaaaga 5463
Query: 244 gtgaagaagagaaataatccgtgagtctaccatacgaactccaggctacactatgtgtac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5462 gtgaagaagagaaataatccgtgagtctaccatacgaactccaggctacactatgtgtac 5403
Query: 304 agcgtgactaaatctagggccaaatatgcagatcaatgtcaatgatagattgartatagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5402 agcgtgactaaatctagggccaaatatgcagatcaatgtcaatgatagattgaatatagg 5343
Query: 364 aggtgagttttgcacagtacgatacatcggatcattgccagartggcctaatatcgttgc 423
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5342 aggtgagttttgcacagtacgatacatcggatcattgccagaatggcctaatatcgttgc 5283
Query: 424 atatggtttagagtgggacaacaagcaaagaggtaaacatgatggaacgttaaacggagt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5282 atatggtttagagtgggacaacaagcaaagaggtaaacatgatggaacgttaaacggagt 5223
Query: 484 acgatacttcagaacatccgatggacagagcagtggctcatttgtgaaggagactaaact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5222 acgatacttcagaacatccgatggacagagcagtggctcatttgtgaaggagactaaact 5163
Query: 544 agatacatctcggcaagagagaacatcgtttgaaggtgcattattgatgaaatacggtga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5162 agatacatctcggcaagagagaacatcgtttgaaggtgcattattgatgaaatacggtga 5103
Query: 604 tacttcatcaatcgatattacctacaaatttgggtcgaaagagactgagtcatatggatt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5102 tacttcatcaatcgatattacctacaaatttgggtcgaaagagactgagtcatatggatt 5043
Query: 664 tgagcatttgaatgasatgaactctgattttgacaagttggaaagtatcacgctatcaga 723
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5042 tgagcatttgaatgaaatgaactctgattttgacaagttggaaagtatcacgctatcaga 4983
Query: 724 aaacaacattttccgagctttcaagacaacctgttcgagcattccgtttaatagtgctca 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4982 aaacaacattttccgagctttcaagacaacctgttcgagcattccgtttaatagtgctca 4923
Query: 784 ttcttctctgcgataccttgatttatccttcaatctgttttctgacataaatgaggtgta 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4922 ttcttctctgcgataccttgatttatccttcaatctgttttctgacataaatgaggtgta 4863
Query: 844 ccgcatactgcgactatttccatctgtcgagactgttatattgagtkggaactgtttcac 903
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4862 ccgcatactgcgactatttccatctgtcgagactgttatattgagtgggaactgtttcac 4803
Query: 904 gaa 906
|||
Sbjct: 4802 gaa 4800
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6167
Number of Sequences: 1807
Number of extensions: 6167
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)